Daylight Summer School 1998, July 28-30, St. John's College,
Santa Fe, NM
Daylight Worksheet - Using Thorfilters and Sthorman
Thorfilters provide a command line interface to the thor and merlin
servers. Shell scripts of thorfilter commands are highly useful for database
administration (this will be covered in day 2). These exercises will introduce
you to thorfilter commands and interfacing with Daylight databases without
an XView interface.
Lookup the clogp and cmr value for dopamine(NCCc1ccc(O)c(O)c1) and create
a postscript file which displays the output with structural depictions
and TDT data.
Give database access to a new user with sthorman
Verify that the thor server is running
Find all available databases which the thorserver has access to.
Find the available options for thorlookup and thorlist
Lookup the datatypes for clogp and cmr in the medchem97demo_datatypes database
thorlist -SECURE_PASSWORDS FALSE medchem97demo_datatypes%@sun1:thor:thor%
Find the datatypes in the above tdt file that are for clogp and cmr
Use thorlookup to output a FDT file with clogp, cmr for
Create postscript file using treetops and view with postscript viewer
Lookup options for treetops
treetops file.fdt |pageview
Daylight Chemical Information Systems Inc.